Files in BlishLab/scriabin
Single-cell resolved interaction analysis through binning
.DS_Store
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/beta_testing.R
R/bin_diff.R
R/binning.R
R/circuits.R
R/interaction_graph.R
R/interaction_programs.R
R/interactome.R
R/rank_edges.R
R/utils.R
R/viz.R
README.md
inst/.DS_Store
inst/lr_resources.rds
man/AlignDatasets.Rd
man/AssembleInteractionGraphs.Rd
man/BinAnnotationPlot.Rd
man/BinCompositionAnalysis.Rd
man/BinDatasets.Rd
man/BinPostHoc.Rd
man/BuildCompHeatmap.Rd
man/BuildGranHeatmap.Rd
man/BuildPriorInteraction.Rd
man/BuildRVHeatmap.Rd
man/BuildSingleHeatmap.Rd
man/BuildVarianceHeatmap.Rd
man/BuildWeightedInteraction.Rd
man/BuildWeightedInteraction_test.Rd
man/CCIMFeaturePlot.Rd
man/ExploreClusters.Rd
man/ExploreInteractome.Rd
man/FindAllCircuits.Rd
man/FindAllInteractionPrograms.Rd
man/FindCircuits.Rd
man/FormatCircuits.Rd
man/GenerateCCIM.Rd
man/GenerateCellSignature.Rd
man/GenerateInteractome.Rd
man/GeneratePrioritizedInteractome.Rd
man/HighlightSR.Rd
man/IDPotentialLigands.Rd
man/IDVariantGenes.Rd
man/IPCellTypeSummary.Rd
man/IPFeaturePlot.Rd
man/InteractionProgramSignificance.Rd
man/InteractionPrograms.Rd
man/LoadLR.Rd
man/LoadRawLR.Rd
man/MapMetaData.Rd
man/PearsonDist.Rd
man/PerturbedBinSummary.Rd
man/PerturbedBins.Rd
man/PlotAlluvium.Rd
man/PlotAlluviumLT.Rd
man/PlotAlluviumLigRec.Rd
man/PlotAlluvium_nocells.Rd
man/PlotLigandTargetAlluvium.Rd
man/PrioritizeInteractome.Rd
man/PrioritizeLigands.Rd
man/RankActiveLigands.Rd
man/RankLigandTargets.Rd
man/ScoreBins.Rd
man/ScoreInteractionPrograms.Rd
man/TopLigandsByIdent.Rd
man/check_completion.Rd
man/crGeneSig.Rd
man/elbow.Rd
man/grapes-notin-grapes.Rd
man/load_nichenet_database.Rd
man/mapvalues.Rd
man/random_connectivity_test.Rd
man/resample.Rd
man/scInteraction.Rd
scriabin.Rproj
vignettes/.DS_Store
vignettes/.gitignore
vignettes/fig_s11_ip.png
vignettes/fig_s11_ral.png
vignettes/fig_s12.png
vignettes/interaction-programs.Rmd
vignettes/ligand-activity-analysis.Rmd
vignettes/ligand-activity-ranking.Rmd
vignettes/lr-database-filtering.Rmd
vignettes/multi-dataset.Rmd
vignettes/single-dataset.Rmd
vignettes/workflow_selection.Md
vignettes/workflow_selection.png
