MapMetaData: Map metadata from Seurat object to CCIM object

In BlishLab/scriabin: Single-cell resolved interaction analysis through binning

Map metadata from Seurat object to CCIM object

Description

Map metadata from Seurat object to CCIM object

Usage

MapMetaData(ccim_seu, seu, columns_map = NULL)

Arguments

ccim_seu	Seurat object generated by GenerateCCIM that contains a cell-cell interaction matrix
seu	Parent Seurat object from which the cell-cell interaction matrix was generated
columns_map	Character vector of names of metadata columns to map from parent Seurat object

Value

Returns a Seurat object with metadata from each sender and receiver cell mapped from the parent Seurat object. Metadata about the sender cell in each cell-cell pair is prepended with "sender_" and metadata about the receiver cell prepended with "receiver_"

BlishLab/scriabin documentation built on July 5, 2023, 1:14 a.m.