parseNovoalignLog: Parse a novoalign log
In BrentLab/brentlabRnaSeqTools: Management/QC for brentlab RNAseq data
View source: R/ProcessingPipelineFunctions.R
parseNovoalignLog R Documentation
Parse a novoalign log
Description
Parse a novoalign log
Usage
parseNovoalignLog(novoalign_log_path)
Arguments
novoalign_log_path
path to a given sample's novoalign log
Value
a dataframe of with columns metric, reads, percent. Metrics will
include: Read Sequences, Unique Alignment, Multi Mapped, No Mapping Found,
Homopolymer Filter
BrentLab/brentlabRnaSeqTools documentation built on Aug. 20, 2023, 9:22 a.m.
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View source: R/ProcessingPipelineFunctions.R
| parseNovoalignLog | R Documentation |
Parse a novoalign log
Description
Parse a novoalign log
Usage
parseNovoalignLog(novoalign_log_path)
Arguments
novoalign_log_path |
path to a given sample's novoalign log |
Value
a dataframe of with columns metric, reads, percent. Metrics will include: Read Sequences, Unique Alignment, Multi Mapped, No Mapping Found, Homopolymer Filter
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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