postImageAnnotationsToDatabase: Send Capsule Image Annotation Data to Database

In BrentLab/brentlabRnaSeqTools: Management/QC for brentlab RNAseq data

Send Capsule Image Annotation Data to Database

Description

Parse the .m output of the annotation script and send to the database.

Usage

postImageAnnotationsToDatabase(
  annotation_path,
  auth_token,
  image_id,
  post_table = TRUE
)

Arguments

annotation_path	path to the .m output of the matematica annotation script
auth_token	your user authentication token to the database. See getUserAuthToken. Note that this will be recorded as the person responsible for these annotations – please only upload annotations which you did yourself
image_id	numeric ID from the capsuleImage table which identifies a given image
post_table	boolean, default TRUE. Set to FALSE to prevent sending the data to the database, and instead return the dataframe

Value

http response if post_table is true, otherwise the dataframe

BrentLab/brentlabRnaSeqTools documentation built on Aug. 20, 2023, 9:22 a.m.