rlePlot: plot RLE for a given column filter
In BrentLab/brentlabRnaSeqTools: Management/QC for brentlab RNAseq data
rlePlot R Documentation
plot RLE for a given column filter
Description
plot RLE for a given column filter
Usage
rlePlot(deseq_object, model_matrix, column_filter, title)
Arguments
deseq_object
a deseq object with results from the DESeq() call
model_matrix
the deseq_object model matrix
column_filter
a vector of fastqFileNames (or whatever the columns – samples – are called)
title
of the plots
Value
list with slots norm_count_rle and effect_removed_rle
BrentLab/brentlabRnaSeqTools documentation built on Aug. 20, 2023, 9:22 a.m.
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| rlePlot | R Documentation |
plot RLE for a given column filter
Description
plot RLE for a given column filter
Usage
rlePlot(deseq_object, model_matrix, column_filter, title)
Arguments
deseq_object |
a deseq object with results from the DESeq() call |
model_matrix |
the deseq_object model matrix |
column_filter |
a vector of fastqFileNames (or whatever the columns – samples – are called) |
title |
of the plots |
Value
list with slots norm_count_rle and effect_removed_rle
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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