rlePlot_helper: the actual plotting function for rlePlot
In BrentLab/brentlabRnaSeqTools: Management/QC for brentlab RNAseq data
rlePlot_helper R Documentation
the actual plotting function for rlePlot
Description
the actual plotting function for rlePlot
Usage
rlePlot_helper(
count_df,
log2_transformed_flag,
title,
gene_id_path = Sys.getenv("GENE_ID_PATH")
)
Arguments
count_df
counts in gene x sample
log2_transformed_flag
boolean where TRUE indicates the counts are in log2 space
title
title of the output plot
gene_id_path
path to gene_ids. Default set to read from Sys.getenv("GENE_ID_PATH")
Value
a ggplot
BrentLab/brentlabRnaSeqTools documentation built on Aug. 20, 2023, 9:22 a.m.
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| rlePlot_helper | R Documentation |
the actual plotting function for rlePlot
Description
the actual plotting function for rlePlot
Usage
rlePlot_helper(
count_df,
log2_transformed_flag,
title,
gene_id_path = Sys.getenv("GENE_ID_PATH")
)
Arguments
count_df |
counts in gene x sample |
log2_transformed_flag |
boolean where TRUE indicates the counts are in log2 space |
title |
title of the output plot |
gene_id_path |
path to gene_ids. Default set to read from Sys.getenv("GENE_ID_PATH") |
Value
a ggplot
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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