Description Usage Arguments Value Note Examples
View source: R/ChemicalFunctions.R
Enriched HPO terms for multiple chemicals
1 | perfFishTestChemMultiple(cname, enrich_1S = TRUE)
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cname |
List of chemical characters. |
enrich_1S |
Enrichment one-sided. Default set to true for enrichment, where the one-sided Fisher's exact is set to alternative = "greater." If enrich_1S = FALSE, Fisher's exact is set to alternative = "two.sided" for two-sided. |
Tibble data frame with enrichment.
Enrichment for multiple chemicals is a simplistic exploratory function, where we take an additive approach. Chemical names and synonyms used are dependent on the chemical names within CTD.
1 | perfFishTestChemMultiple(list("bisphenol A","bisphenol F","bisphenol B"))
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