API for Granoia/splatter-mod
Simple Simulation of Single-cell RNA Sequencing Data

Global functions
BASiCSEstimate Man page
BASiCSEstimate.SingleCellExperiment Man page
BASiCSEstimate.matrix Man page
BASiCSParams Man page
BASiCSParams-class Man page
BASiCSSimulate Man page
Lun2Params Man page
Lun2Params-class Man page
LunParams Man page
LunParams-class Man page
MFAParams Man page
MFAParams-class Man page
Params Man page
Params-class Man page
PhenoParams Man page
PhenoParams-class Man page
SCDDParams Man page
SCDDParams-class Man page
SimpleParams Man page
SimpleParams-class Man page
SparseDCParams Man page
SparseDCParams-class Man page
SplatParams Man page
SplatParams-class Man page
ZINBParams Man page
ZINBParams-class Man page
addFeatureStats Man page
addGeneLengths Man page
bridge Man page
bringItemsForward Man page
compareSCEs Man page
diffSCEs Man page
expandParams Man page
expandParams,BASiCSParams-method Man page
expandParams,LunParams-method Man page
expandParams,SplatParams-method Man page
getLNormFactors Man page
getParam Man page
getParam,Params-method Man page
getParams Man page
getPathOrder Man page
listSims Man page
logistic Man page
lun2Estimate Man page
lun2Estimate.SingleCellExperiment Man page
lun2Estimate.matrix Man page
lun2Simulate Man page
lunEstimate Man page
lunEstimate.SingleCellExperiment Man page
lunEstimate.matrix Man page
lunSimulate Man page
makeCompPanel Man page
makeDiffPanel Man page
makeOverallPanel Man page
mfaEstimate Man page
mfaEstimate.SingleCellExperiment Man page
mfaEstimate.matrix Man page
mfaSimulate Man page
newBASiCSParams Man page
newLun2Params Man page
newLunParams Man page
newMFAParams Man page
newParams Man page
newPhenoParams Man page
newSCDDParams Man page
newSimpleParams Man page
newSparseDCParams Man page
newSplatParams Man page
newZINBParams Man page
phenoEstimate Man page
phenoEstimate.SingleCellExperiment Man page
phenoEstimate.matrix Man page
phenoSimulate Man page
rbindMatched Man page
scDDEstimate Man page
scDDEstimate.SingleCellExperiment Man page
scDDEstimate.default Man page
scDDEstimate.matrix Man page
scDDSimulate Man page
setParam Man page
setParam,BASiCSParams-method Man page
setParam,Lun2Params-method Man page
setParam,LunParams-method Man page
setParam,Params-method Man page
setParam,PhenoParams-method Man page
setParam,SCDDParams-method Man page
setParam,SplatParams-method Man page
setParam,ZINBParams-method Man page
setParamUnchecked Man page
setParamUnchecked,Params-method Man page
setParams Man page
setParams,Params-method Man page
setParams,SplatParams-method Man page
setParamsUnchecked Man page
showDFs Man page
showPP Man page
showValues Man page
simpleEstimate Man page
simpleEstimate.SingleCellExperiment Man page
simpleEstimate.matrix Man page
simpleSimulate Man page
sparseDCEstimate Man page
sparseDCEstimate.SingleCellExperiment Man page
sparseDCEstimate.matrix Man page
sparseDCSimulate Man page
splatEstBCV Man page
splatEstDropout Man page
splatEstLib Man page
splatEstMean Man page
splatEstOutlier Man page
splatEstimate Man page
splatEstimate.SingleCellExperiment Man page
splatEstimate.matrix Man page
splatSimBCVMeans Man page
splatSimBatchCellMeans Man page
splatSimBatchEffects Man page
splatSimCellMeans Man page
splatSimDE Man page
splatSimDropout Man page
splatSimGeneMeans Man page
splatSimGroupCellMeans Man page
splatSimGroupDE Man page
splatSimLibSizes Man page
splatSimPathCellMeans Man page
splatSimPathDE Man page
splatSimSingleCellMeans Man page
splatSimTrueCounts Man page
splatSimulate Man page
splatSimulateGroups Man page
splatSimulatePaths Man page
splatSimulateSingle Man page
splatter Man page
splatter-package Man page
summariseDiff Man page
winsorize Man page
zinbEstimate Man page
zinbEstimate.SingleCellExperiment Man page
zinbEstimate.matrix Man page
zinbSimulate Man page
Granoia/splatter-mod documentation built on May 28, 2019, 12:31 a.m.