summariseDiff: Summarise diffSCESs

In Granoia/splatter-mod: Simple Simulation of Single-cell RNA Sequencing Data

Description

Summarise the results of diffSCEs. Calculates the Median Absolute Deviation (MAD), Mean Absolute Error (MAE) and Root Mean Squared Error (RMSE) for the various properties and ranks them.

Usage

summariseDiff(diff)

Arguments

diff	Output from diffSCEs

Value

data.frame with MADs, MAEs, RMSEs, scaled statistics and ranks

Examples

sim1 <- splatSimulate(nGenes = 1000, batchCells = 20)
sim2 <- simpleSimulate(nGenes = 1000, nCells = 20)
difference <- diffSCEs(list(Splat = sim1, Simple = sim2), ref = "Simple")
summary <- summariseDiff(difference)
head(summary)

Granoia/splatter-mod documentation built on May 28, 2019, 12:31 a.m.