getGenomeObject: getGenomeObject
In GreenleafLab/ChrAccR: Analyzing chromatin accessibility data in R
View source: R/utils_chromVAR.R
getGenomeObject R Documentation
getGenomeObject
Description
retrieve the appropriate BSgenome for an assembly string
Usage
getGenomeObject(assembly, adjChrNames = TRUE)
Arguments
assembly
string specifying the assembly
adjChrNames
should the prefix "chr" be added to main chromosomes if not already present and chrMT be renamed to chrM?
Value
BSgenome object
GreenleafLab/ChrAccR documentation built on March 22, 2023, 11:42 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/utils_chromVAR.R
| getGenomeObject | R Documentation |
getGenomeObject
Description
retrieve the appropriate BSgenome for an assembly string
Usage
getGenomeObject(assembly, adjChrNames = TRUE)
Arguments
assembly |
string specifying the assembly |
adjChrNames |
should the prefix "chr" be added to main chromosomes if not already present and chrMT be renamed to chrM? |
Value
BSgenome object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.