mergePseudoBulk-DsATACsc-method: mergePseudoBulk-methods
In GreenleafLab/ChrAccR: Analyzing chromatin accessibility data in R
mergePseudoBulk,DsATACsc-method R Documentation
mergePseudoBulk-methods
Description
Merge cells into pseudobulk samples based on annotation
Usage
## S4 method for signature 'DsATACsc'
mergePseudoBulk(.object, mergeGroups, cleanSampleAnnot = TRUE)
Arguments
.object
DsATACsc object
mergeGroups
factor or character vector or column name in sample annotation table.
Can alternatively be a (named) list containing sample indices or names
for each group to merge.
cleanSampleAnnot
clean up sample annotation table in the new object
Value
a new DsATAC object with cells merged into pseudobulk samples
Author(s)
Fabian Mueller
GreenleafLab/ChrAccR documentation built on March 22, 2023, 11:42 p.m.
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| mergePseudoBulk,DsATACsc-method | R Documentation |
mergePseudoBulk-methods
Description
Merge cells into pseudobulk samples based on annotation
Usage
## S4 method for signature 'DsATACsc'
mergePseudoBulk(.object, mergeGroups, cleanSampleAnnot = TRUE)
Arguments
.object |
|
mergeGroups |
factor or character vector or column name in sample annotation table. Can alternatively be a (named) list containing sample indices or names for each group to merge. |
cleanSampleAnnot |
clean up sample annotation table in the new object |
Value
a new DsATAC object with cells merged into pseudobulk samples
Author(s)
Fabian Mueller
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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