projectMatrix_UMAP | R Documentation |
given a (count) matrix and dimension reduction result, return the projected UMAP coordinates in the embedding space
projectMatrix_UMAP(X, umapObj, binarize = TRUE, addPcCoord = FALSE)
X |
matrix to be projected (features X samples) |
umapObj |
dimension reduction result as returned by |
binarize |
binarize the counts before projecting |
addPcCoord |
also add PC coordinates to the resulting matrix |
Projected UMAP coordinates
Fabian Mueller
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