| BatchEffect_Combat | BatchEffect_Combat function |
| BatchEffect_PCAHeatmap | BatchEffect_PCAHeatmap function |
| BatchEffect_PCAHeatmap_Merge | Merge multiple heatmaps into one plot |
| BatchEffect_PointPlot | BatchEffect_PointPlot Function |
| BatchEffect_prc | BatchEffect_prc function |
| BatchEffect_Visualise | BatchEffect_Visualise function |
| Clean_OldSets | Clean_OldSets function |
| ConvertSet | ConvertSet function |
| DMP_limma | Detect differentially methylated positions in the DNA using... |
| DMR_dmrcate | Detect differentially methylated positions in the DNA using... |
| FindBadSamples | FindBadSamples function |
| getPath | GetPath function |
| Make_RGset | Make_RGset function |
| MergeMetadata | MergeMetadata function |
| ProbeBackgroundCheck | ProbeBackgroundCheck function |
| ProbeExclusion | ProbeExclusion function |
| ProbeNormalisation | ProbeNormalisation function |
| RemoveBadSamples | RemoveBadSamples function |
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