BatchEffect_PCAHeatmap: BatchEffect_PCAHeatmap function
In GregoireCoppens/LICMEpigenetics: Processing of Epigenetic data
View source: R/BatchEffect_Visualise.R
BatchEffect_PCAHeatmap R Documentation
BatchEffect_PCAHeatmap function
Description
Function that creates a p-value heatmap from categorical and continuous variables using F-tests and correlation tests (Pearson's product) to evaluate the presence of batch effect.
Usage
BatchEffect_PCAHeatmap(x, Cat_vars = c(), Cont_vars = c())
Arguments
x
Epigenetic set object.
Cat_vars
Categorical variables for the heatmap
Cont_vars
Continues variables for the heatmap
Value
Updated Epigenetic set object.
GregoireCoppens/LICMEpigenetics documentation built on April 24, 2023, 10:02 a.m.
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View source: R/BatchEffect_Visualise.R
| BatchEffect_PCAHeatmap | R Documentation |
BatchEffect_PCAHeatmap function
Description
Function that creates a p-value heatmap from categorical and continuous variables using F-tests and correlation tests (Pearson's product) to evaluate the presence of batch effect.
Usage
BatchEffect_PCAHeatmap(x, Cat_vars = c(), Cont_vars = c())
Arguments
x |
Epigenetic set object. |
Cat_vars |
Categorical variables for the heatmap |
Cont_vars |
Continues variables for the heatmap |
Value
Updated Epigenetic set object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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