Description
Usage
Arguments
Value
View source: R/get_user_metadata.R
This internal function loads user-supplied metadata from a JSON
file.
user_json_file |
A JSON file describing mappings between internal names
and names in the actual data files. It can contain the following entries:
content The name of the column describing sample content.
concentration The name of the column containing the
concentration series.
fret_channel The name of the column containing fluorescence
intensities from the FRET channel.
acceptor_channel The name of the column containing
fluorescence intensities from the acceptor channel.
donor_channel The name of the column containing fluorescence
intensities from the donor channel.
titration The name describing points of the titration series.
acceptor_only The name describing points of the control
series with only acceptor.
donor_only The name describing points of the control series
with only donor.
buffer_only The name describing points of the control
series with only buffer.
parallel The name of the column containing fluorescence
intensities from the parallel polarization plane.
perpendicular The name of the column containing fluorescence
intensities from the perpendicular polarization plane.
polarization The name of the column containing fluorescence
polarization.
anisotropy The name of the column containing fluorescence
anisotropy.
intensity The name of the column containing fluorescence
intensity.
baseline The name describing points of the baseline series
in a fluorescence polarization or anisotropy dataset.
|
An invisible copy of the original environment containing default
metadata. As a side effect, updates the column and sample names in the
package-wide environment.
Guilz/rfret documentation built on Oct. 18, 2021, 2:14 p.m.