build_IMGT_reference: Build IMGT database reference
In HatsuneCode/TrustVDJ: Tools for Immune Repertoire Analysis
View source: R/buildReference.r
build_IMGT_reference R Documentation
Build IMGT database reference
Description
Download reference sequences from the IMGT (the international ImMunoGeneTics information system,
http://www.imgt.org) database and split the sequences by species.
Usage
build_IMGT_reference(outdir = NULL, method = NULL, verbose = TRUE)
Arguments
outdir
character. Default getwd()
method
character. Method to be used for downloading files, equal to download.file. Default 'libcurl'
verbose
logical. Default TRUE
Value
if success, return TRUE
Examples
build_IMGT_reference('IMGT_ref')
HatsuneCode/TrustVDJ documentation built on Aug. 13, 2022, 9:36 p.m.
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View source: R/buildReference.r
| build_IMGT_reference | R Documentation |
Build IMGT database reference
Description
Download reference sequences from the IMGT (the international ImMunoGeneTics information system, http://www.imgt.org) database and split the sequences by species.
Usage
build_IMGT_reference(outdir = NULL, method = NULL, verbose = TRUE)
Arguments
outdir |
character. Default |
method |
character. Method to be used for downloading files, equal to |
verbose |
logical. Default TRUE |
Value
if success, return TRUE
Examples
build_IMGT_reference('IMGT_ref')
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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