consensus-class: The Consensus Class

In HatsuneCode/TrustVDJ: Tools for Immune Repertoire Analysis

The Consensus Class

Description

The Consensus Class

Value

an object of the consensus class

Slots

ID

character.

ClonoID

character.

Vgene

character.

Dgene

character.

Jgene

character.

Cgene

character.

Chain

character.

FWR1dna

character.

FWR1aa

character.

CDR1dna

character.

CDR1aa

character.

FWR2dna

character.

FWR2aa

character.

CDR2dna

character.

CDR2aa

character.

FWR3dna

character.

FWR3aa

character.

CDR3dna

character.

CDR3aa

character.

FWR4dna

character.

FWR4aa

character.

iUMI

character.

UMIs

numeric.

iRead

character.

Reads

numeric.

Cells

numeric.

Barcodes

character.

FullLength

logical.

CDR3germlineSimilarity

numeric.

HatsuneCode/TrustVDJ documentation built on Aug. 13, 2022, 9:36 p.m.