API for HenryWard/orthrus
Scoring Combinatorial CRISPR Screens
| Global functions | |
|---|---|
| add_screen | Man page Source code |
| add_screens_from_table | Man page Source code |
| call_combn_hits | Man page Source code |
| call_condition_hits | Man page Source code |
| check_screen_params | Man page Source code |
| chymera_batch_table | Man page |
| chymera_paralog | Man page |
| chymera_sample_table | Man page |
| compute_null_model | Source code |
| essential_lfc_qc | Man page Source code |
| filter_reads | Man page Source code |
| fix_residual_length | Source code |
| load_batch_table | Man page Source code |
| loess_MA | Source code |
| normalize_reads | Man page Source code |
| normalize_screens | Man page Source code |
| orthrus_wrapper | Man page Source code |
| plot_combn_gene_residuals | Man page Source code |
| plot_combn_residuals | Man page Source code |
| plot_combn_response | Man page Source code |
| plot_condition_gene_residuals | Man page Source code |
| plot_condition_residuals | Man page Source code |
| plot_condition_response | Man page Source code |
| plot_heatmap | Man page Source code |
| plot_lfc_qc | Man page Source code |
| plot_reads | Man page Source code |
| plot_reads_qc | Man page Source code |
| plot_samples | Man page Source code |
| remove_screen | Man page Source code |
| retrieve_guides_by_gene | Man page Source code |
| retrieve_guides_by_label | Man page Source code |
| score_combn_batch | Man page Source code |
| score_combn_vs_single | Man page Source code |
| score_conditions_batch | Man page Source code |
| score_conditions_vs_control | Man page Source code |
| score_conditions_vs_control_inner | Source code |
| sorted_merge | Source code |
| split_guides | Man page Source code |
| split_guides_by_type | Man page Source code |
| subset_to_matching_ids | Source code |
| unique_gene_pairs | Man page Source code |
