plot_samples: Plots sample comparisons.
In HenryWard/orthrus: Scoring Combinatorial CRISPR Screens

plot_samples

R Documentation

Plots sample comparisons.

Description

Pretty-plots comparisons between two samples in a scatterplot.

Usage

plot_samples(
  df,
  xcol,
  ycol,
  xlab,
  ylab,
  color_col = NULL,
  color_lab = NULL,
  color_values = NULL,
  print_cor = FALSE
)

Arguments

`df`	Reads or lfc dataframe.
`xcol`	Name of column containing values to plot on the x-axis.
`ycol`	Name of column containing values to plot on the y-axis.
`xlab`	X-axis label.
`ylab`	Y-axis label.
`color_col`	Name of column to color points by (optional).
`color_lab`	Name of color legend (optional, defaults to color_col).
`color_values`	Named list of discrete values in color_col mapped to their respective colors (defaults to RColorBrewer's Set2 colors with NULL).
`print_cor`	If true, prints Pearson correlation between columns (default FALSE).

Value

A list of three elements. The first is a ggplot object, the second is the correlation between xcol and ycol, and the third is the Spearman correlation between xcol and ycol.

HenryWard/orthrus documentation built on June 2, 2023, 10:28 p.m.