Files in HuaZou/MyRtools
Statistic Approaches on Data Analysis
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
MyRtools.Rproj
NAMESPACE
R/AA_CausalMediation.R
R/AA_PartialCorrelation.R
R/AA_SimpleCorrelation.R
R/DA_ANCOM.R
R/DA_DESeq2.R
R/DA_LEfSe.R
R/DA_T_Test.R
R/DA_T_Wilcox_Test.R
R/DA_WilcoxRankSumTest.R
R/DA_edgeR.R
R/DA_limma_voom.R
R/Data.R
R/Global_Ordination.R
R/Global_PERMANOVA.R
R/preprocess_ExpressionSet.R
R/preprocess_imputation.R
R/preprocess_installation.R
R/preprocess_normalization.R
R/preprocess_transform.R
R/preprocess_trim.R
R/utilities.R
README.md
data/ExprSetRawCount.rda
data/ExprSetRawRB.rda
figure/01.Overview.png
figure/01.Overview_release_0.0.1.jpg
inst/extdata/Genus_feature.csv
inst/extdata/Genus_relative_abundance.tsv
inst/extdata/Metadata.csv
inst/extdata/Species_feature.csv
inst/extdata/Species_relative_abundance.tsv
man/AA_Mediation.Rd
man/AA_PartialCC.Rd
man/AA_SimpleCC.Rd
man/InstallPackage.Rd
man/get_ExprSet.Rd
man/get_NormalizedExprSet.Rd
man/get_TransformedExprSet.Rd
man/get_TrimedExprSet.Rd
man/get_imputedExprSet.Rd
man/get_processedExprSet.Rd
man/impute-methods.Rd
man/intersect_feature.Rd
man/lefser.Rd
man/normalize-methods.Rd
man/run_ANCOM.Rd
man/run_DESeq2.Rd
man/run_LEfSe.Rd
man/run_Limma.Rd
man/run_MDS.Rd
man/run_OddRatio.Rd
man/run_OrdPlot.Rd
man/run_PCA.Rd
man/run_PCoA.Rd
man/run_PERMANOVA.Rd
man/run_TWilcox.Rd
man/run_Ttest.Rd
man/run_Ttest_Paired.Rd
man/run_Wilcox.Rd
man/run_Wilcox_Paired.Rd
man/run_edgeR.Rd
man/run_impute.Rd
man/run_normalize.Rd
man/run_transform.Rd
man/run_trim.Rd
man/run_tsne.Rd
man/run_umap.Rd
vignettes/.gitignore
vignettes/MyRtools.Rmd
