sig_roc: Drawing multiple AUC into one graph

In IOBR/IOBR: Immune Oncology Biological Research

Drawing multiple AUC into one graph

Description

Drawing multiple AUC into one graph

Usage

sig_roc(
  data,
  response,
  variables,
  fig.path = ".",
  main = NULL,
  file.name = NULL,
  palette = "jama",
  cols = NULL,
  alpha = 1,
  compare = FALSE,
  smooth = TRUE,
  compare_method = "bootstrap",
  boot.n = 100
)

Arguments

data	data frame with response and variables
response	response name of data
variables	variables
fig.path	default is current working directory
main	main title of plot
file.name	file.name, default is
palette	default is 'jama', if number of variables is bigger than colors of palettes, 'random' color will be applied
cols	users can provide cols manually
alpha	default is 1
compare	default is FALSE
smooth	default is TRUE
compare_method	default is bootstrap, other option: “delong”, “venkatraman”
boot.n	default is 100 when bootstrap is chosen.

Author(s)

Dongqiang Zeng

Examples

data("tcga_stad_pdata", package = "IOBR")
sig_roc(data = tcga_stad_pdata, response = "OS_status", variables = c("TMEscore_plus", "GZMB", "GNLY"))

IOBR/IOBR documentation built on May 5, 2024, 2:34 p.m.