Description Usage Arguments Value Examples
View source: R/analysisWGS_determineMutationalBurden.R
Determine the mutational burden of the CPCT-02/HMF samples.
1 | determineMutationalBurden(data.Cohort, minTAF.Muts = 0, minTAF.SV = 0)
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data.Cohort |
(list): Results of the importWGSOfCohort function. |
minTAF.Muts |
(double): Min. TAF for SNV, InDel, MNV in order to count. |
minTAF.SV |
(double): Min. TAF for structural variants in order to count. |
(tibble) Returns a tibble of the dNdS results.
1 2 | data.Cohort <- R2CPCT::importWGSOfCohort(<cpctIds>, <combinedData>)
determineMutationalBurden(data.Cohort)
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