run.SVM: Wraper for running svm

In Japrin/sscClust: simpler single cell RNAseq data clustering

Wraper for running svm

Description

Wraper for running svm

Usage

run.SVM(xdata, xlabel, ydata, kern = "linear")

Arguments

xdata	data frame or matrix; data used for training, with sample id in rows and variables in columns
xlabel	factor; classification label of the samples, with length equal to the number of rows in xdata
ydata	data frame or matrix; data to be predicted the label, same format as xdata
kern	character; which kernel to use, can be one of linear, polynomial, radial and sigmoid (default: "linear")

Value

List with the following elements:

ylabel	ppredicted labels of the samples in ydata
rfsel	trained model; output of varSelRF()

Japrin/sscClust documentation built on Dec. 15, 2022, 1:04 p.m.