JeffWeinell/misc.wrappers
Miscellaneous Wrapper Functions for Spatial Population Genomics

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238
Source code
26
Man pages
115
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JeffWeinell/misc.wrappers: Miscellaneous Wrapper Functions for Spatial Population Genomics
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API

API for JeffWeinell/misc.wrappers
Miscellaneous Wrapper Functions for Spatial Population Genomics

Global functions
EvannoPlots Man page Source code
IM Source code
Rsh Man page Source code
ZM Source code
admixtureMap Man page Source code
admixturePlots Man page Source code
assignmentPlots Man page Source code
bbox2points Man page Source code
bsum Source code
check.if.executable Man page Source code
check_mcmcpath_contents Man page Source code
check_plot_params Man page Source code
cladesub Man page Source code
clipMat Source code
compSet Source code
config_miscwrappers Man page Source code
coords2sp.poly Man page Source code
cpSNPsVCF Man page Source code
create.outer Man page Source code
create_popfile Man page Source code
cstacks_cleanup Man page Source code
cstacks_setup Man page Source code
dapc.biplot.arrange Man page Source code
dapc.plot.arrange Man page Source code
dapc.plot.arrange2 Man page Source code
decompose_distances Man page Source code
default_eems_colors Man page Source code
dfTransform Man page Source code
diffcol Man page Source code
disjoint Source code
dlogunif Man page
dunif.quotient.a0 Man page Source code
dunif.quotient.iid Man page Source code
easySFS_fsc2 Man page Source code
eems_cleanup Man page Source code
eems_contours Man page Source code
eemsgg2raster Man page Source code
equiv Man page Source code
equivalencyMats Man page Source code
evalfun Man page Source code
exepaths_miscwrappers Man page Source code
extract.base.polygons Man page Source code
fastsimcoalsims_Par Man page Source code
filled_contour_graph Man page Source code
filled_contour_rates Man page Source code
filled_eems_contour Man page Source code
filled_prob_contour Man page Source code
filter.var Man page Source code
filter.vcf Man page Source code
find.exe.path Man page Source code
fitmodels Man page Source code
fracD Man page Source code
genind2diffs Man page Source code
geo_distm Man page Source code
get_dist_metric Man page Source code
gg.world110_proj Man page Source code
ggscatter.dapc Man page
goodcolors Man page Source code
goodcolors2 Man page Source code
gstacks_cleanup Man page Source code
gstacks_setup Man page Source code
hex2dec Man page Source code
intMat Source code
is_color Man page Source code
load_required_packages Man page Source code
minCladesList Man page Source code
newpoint Man page Source code
pairwise_dist Man page Source code
partitions Source code
plot.funUnif Man page Source code
plot_eems Man page Source code
plot_log_posterior Man page Source code
plot_model Man page Source code
plot_pairwise_dissimilarities_ Man page Source code
plottable.dapc Man page Source code
points.on.land Man page Source code
populations_cleanup Man page Source code
populations_setup Man page Source code
produnif Man page Source code
pset Man page
rangeBuffer Man page Source code
rcoords Man page Source code
read_dimns Man page Source code
read_matrix Man page Source code
read_vector Man page Source code
read_voronoi Man page Source code
reassign Man page Source code
reflexive Source code
rgb.cb Man page Source code
rlogunif Man page
rsbatch Man page Source code
run_DAPC Man page Source code
run_delimitR Man page Source code
run_fastStructure Man page Source code
run_sNMF Man page Source code
run_structure Man page Source code
runeems_snps_setup Man page Source code
runtess Man page Source code
rx2y2 Man page Source code
sim.vcf Man page Source code
sp2coords Man page Source code
sq Man page Source code
sstacks_cleanup Man page Source code
sstacks_setup Man page Source code
stacks_cleanup Man page Source code
summarize_VCFs Man page Source code
summarize_stacks Man page Source code
sumnorm.PDF Man page Source code
sumunif Man page Source code
symmetric Source code
theme_void Man page Source code
tiles2contours Man page Source code
transitionModels Man page Source code
transitive Source code
tsv2bam_cleanup Man page Source code
tsv2bam_setup Man page Source code
unionMat Source code
update_miscwrappers Man page Source code
ustacks_cleanup Man page Source code
ustacks_setup Man page Source code
vcf2fastStructure Man page Source code
vcf2parts Man page Source code
vcf2phy Man page Source code
vcf2structure Man page Source code
vcfR2geno Man page Source code
vcfR2lfmm Man page Source code
vcf_getSNP Man page Source code
JeffWeinell/misc.wrappers documentation built on Sept. 20, 2023, 12:42 p.m.

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