Files in Keniajin/protGear
Protein Micro Array Data Management and Interactive Visualization
DESCRIPTION
NAMESPACE
NEWS.md
R/buffer_spot_functions.R
R/cv_by_sample_estimation.R
R/cv_estimation_tag_functions.R
R/global_functions.R
R/launch_protGear_interactive.R
R/normalisation_functions.R
R/read_files_functions.R
README.md
_config.yml
_pkgdown.yml
docs/404.html
docs/articles/index.html
docs/articles/vignette.html
docs/articles/vignette_files/figure-html/before_after_tag-1.png
docs/articles/vignette_files/figure-html/best_cv_plot-1.png
docs/articles/vignette_files/figure-html/bg_plot-1.png
docs/articles/vignette_files/figure-html/bg_vs_fg-1.png
docs/articles/vignette_files/figure-html/buffer_spots_data-1.png
docs/articles/vignette_files/figure-html/cv_by_sample-1.png
docs/articles/vignette_files/figure-html/pca-1.png
docs/articles/vignette_files/figure-html/replicates_plot-1.png
docs/authors.html
docs/index.html
docs/news/index.html
docs/pkgdown.yml
docs/reference/array_vars.html
docs/reference/best_CV_estimation.html
docs/reference/bg_correct.html
docs/reference/buffer_spots.html
docs/reference/check_sampleID_files.html
docs/reference/create_dir.html
docs/reference/cv_by_sample_estimation.html
docs/reference/cv_estimation.html
docs/reference/error_replicates.html
docs/reference/extract_bg.html
docs/reference/index.html
docs/reference/launch_protGear_interactive.html
docs/reference/launch_select.html
docs/reference/matrix_normalise.html
docs/reference/merge_sampleID.html
docs/reference/minpositive.html
docs/reference/name_of_files.html
docs/reference/output_trend_stats.html
docs/reference/plot_FB.html
docs/reference/plot_bg-1.png
docs/reference/plot_bg.html
docs/reference/plot_buffer-1.png
docs/reference/plot_buffer.html
docs/reference/plot_normalised.html
docs/reference/plot_normalised_antigen.html
docs/reference/read_array_files.html
docs/reference/read_array_visualize.html
docs/reference/rlm_normalise.html
docs/reference/rlm_normalise_matrix.html
docs/reference/tag_subtract.html
docs/reference/visualize_slide-1.png
docs/reference/visualize_slide.html
docs/reference/visualize_slide_2d-1.png
docs/reference/visualize_slide_2d.html
inst/extdata/Data1_bg_sample.csv
inst/extdata/Data1_sample.csv
inst/extdata/TAG_antigens.csv
inst/extdata/array_data/machine1/BRB001.txt
inst/extdata/array_data/machine1/KK2-06.txt
inst/extdata/array_matrix.csv
inst/extdata/array_sampleID/BRB001.csv
inst/extdata/array_sampleID/KK2-06.csv
inst/extdata/bg_example.csv
inst/extdata/buffers_sample2.csv
inst/extdata/dataC.csv
inst/extdata/matrix_antigen.csv
inst/scripts/data.R
inst/scripts/data.md
inst/shiny-examples/protGear_interactive/about_app/server.R
inst/shiny-examples/protGear_interactive/about_app/ui.R
inst/shiny-examples/protGear_interactive/app.R
inst/shiny-examples/protGear_interactive/error/error_replicates.txt
inst/shiny-examples/protGear_interactive/errors/error_replicates.txt
inst/shiny-examples/protGear_interactive/global.R
inst/shiny-examples/protGear_interactive/help.csv
inst/shiny-examples/protGear_interactive/images/image_slide.png
inst/shiny-examples/protGear_interactive/images/protGear_logo.png
inst/shiny-examples/protGear_interactive/intro_text.html
inst/shiny-examples/protGear_interactive/load_data_dashboard/bloomfilter.R
inst/shiny-examples/protGear_interactive/load_data_dashboard/server.R
inst/shiny-examples/protGear_interactive/load_data_dashboard/ui.R
inst/shiny-examples/protGear_interactive/load_data_dashboard/ui_dashboard.R
inst/shiny-examples/protGear_interactive/protGear_interactive.Rmd
inst/shiny-examples/protGear_interactive/protGear_logo_b.png
man/array_vars.Rd
man/best_CV_estimation.Rd
man/bg_correct.Rd
man/buffer_spots.Rd
man/check_sampleID_files.Rd
man/create_dir.Rd
man/cv_by_sample_estimation.Rd
man/cv_estimation.Rd
man/error_replicates.Rd
man/extract_bg.Rd
man/figures/README-pressure-1.png
man/launch_protGear_interactive.Rd
man/launch_select.Rd
man/matrix_normalise.Rd
man/merge_sampleID.Rd
man/minpositive.Rd
man/name_of_files.Rd
man/output_trend_stats.Rd
man/plot_FB.Rd
man/plot_bg.Rd
man/plot_buffer.Rd
man/plot_normalised.Rd
man/plot_normalised_antigen.Rd
man/read_array_files.Rd
man/read_array_visualize.Rd
man/rlm_normalise.Rd
man/rlm_normalise_matrix.Rd
man/tag_subtract.Rd
man/visualize_slide.Rd
man/visualize_slide_2d.Rd
vignettes/folder_structure.png
vignettes/image_slide.png
vignettes/vignette.Rmd
