enrobj2Matrix: Enrichment object list to matrix
In LittleHeronCodes/Lazy2: Lazy Package
View source: R/pathway_analysis2.R
enrobj2Matrix R Documentation
Enrichment object list to matrix
Description
Turn enrichment object list (generated by ClusterProfiler enricher or Gen_enrichment) into matrix of needed value for drawing heatmap.
Usage
enrobj2Matrix(enrobj, val.col = "pvalue", log = TRUE)
Arguments
enrobj
Enrichment result list.
val.col
Column to output.
log
Should the output be log10 transformed? (used if p value is input)
Value
List of enricher Object: up, down
LittleHeronCodes/Lazy2 documentation built on April 20, 2024, 11:24 p.m.
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View source: R/pathway_analysis2.R
| enrobj2Matrix | R Documentation |
Enrichment object list to matrix
Description
Turn enrichment object list (generated by ClusterProfiler enricher or Gen_enrichment) into matrix of needed value for drawing heatmap.
Usage
enrobj2Matrix(enrobj, val.col = "pvalue", log = TRUE)
Arguments
enrobj |
Enrichment result list. |
val.col |
Column to output. |
log |
Should the output be log10 transformed? (used if p value is input) |
Value
List of enricher Object: up, down
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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