getEnrichmentFactor: Calculate Enrichment factor
In LittleHeronCodes/Lazy2: Lazy Package
getEnrichmentFactor R Documentation
Calculate Enrichment factor
Description
Enrichment factor represents the "enrichment" of overlap between two sets in a given space.
This is calculated as (observed count) / (expected count).
Usage
getEnrichmentFactor(setA, setB, setT, psc = 0)
Arguments
setA
set input1 as vectors
setB
set input2 as vectors
setT
total set as vectors
psc
pseudocount for when expected count is too low.
Examples
A <- c(1:5)
B <- c(3:7)
total <- c(1:10)
getEnrichmentFactor(A, B, total)
LittleHeronCodes/Lazy2 documentation built on April 20, 2024, 11:24 p.m.
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| getEnrichmentFactor | R Documentation |
Calculate Enrichment factor
Description
Enrichment factor represents the "enrichment" of overlap between two sets in a given space. This is calculated as (observed count) / (expected count).
Usage
getEnrichmentFactor(setA, setB, setT, psc = 0)
Arguments
setA |
set input1 as vectors |
setB |
set input2 as vectors |
setT |
total set as vectors |
psc |
pseudocount for when expected count is too low. |
Examples
A <- c(1:5)
B <- c(3:7)
total <- c(1:10)
getEnrichmentFactor(A, B, total)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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