CAGEfightR is an R-package for analyzing Cap Analysis of Gene Expression (CAGE) data in Bioconductor.


Install the most recent stable version from Bioconductor:

```{r bioconductor, eval=FALSE} if (!requireNamespace("BiocManager", quietly=TRUE)) install.packages("BiocManager") BiocManager::install("CAGEfightR")

Or install the development version directly from GitHub using `devtools`:

``` r
# Install CRAN packages and CAGEfightR
devtools::install_github("MalteThodberg/CAGEfightR", build_vignettes = TRUE)

When using devtools you might need to manually install dependencies from Bioconductor (See DESRIPTION for a list of these).


See the vignette for an in-depth guide to using CAGEfightR!

MalteThodberg/CAGEfightR documentation built on March 14, 2019, 10:56 p.m.