checkPeaked: Helper for checking cluster with peaks
In MalteThodberg/CAGEfightR: Analysis of Cap Analysis of Gene Expression (CAGE) data using Bioconductor
Description
Usage
Arguments
Value
See Also
Examples
Description
Checks whether a supplied set of cluster have valid peaks: Whether the thick
column contains IRanges all contained within the main ranges.
Usage
1
checkPeaked(object)
Arguments
object
GRanges or GPos: Clusters with peaks to be checked.
Value
TRUE if object is correct format, otherwise an error is thrown
See Also
Other Checking functions:
checkPooled()
Examples
1
2
data(exampleUnidirectional)
checkPeaked(rowRanges(exampleUnidirectional))
MalteThodberg/CAGEfightR documentation built on Sept. 11, 2021, 4:42 a.m.
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Description Usage Arguments Value See Also Examples
Description
Checks whether a supplied set of cluster have valid peaks: Whether the thick column contains IRanges all contained within the main ranges.
Usage
1 | checkPeaked(object)
|
Arguments
object |
GRanges or GPos: Clusters with peaks to be checked. |
Value
TRUE if object is correct format, otherwise an error is thrown
See Also
Other Checking functions:
checkPooled()
Examples
1 2 | data(exampleUnidirectional)
checkPeaked(rowRanges(exampleUnidirectional))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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