quickTSSs: Identify and quantify Transcription Start Sites (TSSs).

Description Usage Arguments Value See Also Examples

Description

A convienient wrapper around calcTPM, calcPooled, tuneTagClustering, clusterUnidirectionally and quantifyClusters.

Usage

1
quickTSSs(object)

Arguments

object

RangedSummarizedExperiment: Location and counts of CTSSs, usually found by calling quantifyCTSSs.

Value

RangedSummarizedExperiment containing location and counts of TSSs

See Also

Other Wrapper functions: quickEnhancers

Examples

1
# See the CAGEfightR vignette for an overview!

MalteThodberg/CAGEfightR documentation built on May 8, 2019, 3:36 p.m.