CreateIntLimObject: Generic function to create constructor of MultiDataSet gene...

In Mathelab/IntLIM: Integration of Omics Data Using Linear Modeling

Generic function to create constructor of MultiDataSet gene object

Description

Generic function to create constructor of MultiDataSet gene object

Usage

CreateIntLimObject(genefdata, metabfdata, pdata, geneid, metabid,
  metabdata, genedata, logmetab = FALSE, loggene = FALSE)

Arguments

genefdata	gene meta data
metabfdata	metabolite meta data
pdata	sample meta data
geneid	name of column from metabolite meta data to be used as id (required if a gene meta data file is present, must match gene expression matrix))
metabid	name of column from gene meta data to be used as id (required if a metabolite meta data file is present, must match metabolite abundances matrix))
metabdata	metabolite abundances (samples are in columns)
genedata	gene expression (samples are in columns)
logmetab	T/F
loggene	T/F

Mathelab/IntLIM documentation built on July 9, 2022, 5:10 p.m.