PlotDistributions: Get some stats after reading in data

In Mathelab/IntLIM: Integration of Omics Data Using Linear Modeling

Get some stats after reading in data

Description

Get some stats after reading in data

Usage

PlotDistributions(inputData, viewer = T, palette = "Set1")

Arguments

inputData	IntLimObject output of ReadData()
viewer	whether the plot should be displayed in the RStudio viewer (T) or in Shiny/Knittr (F)
palette	choose an RColorBrewer palette ("Set1", "Set2", "Set3", "Pastel1", "Pastel2", "Paired", etc.) or submit a vector of colors

Value

a highcharter object

Examples

dir <- system.file("extdata", package="IntLIM", mustWork=TRUE)
csvfile <- file.path(dir, "NCItestinput.csv")
mydata <- ReadData(csvfile,metabid='id',geneid='id')
PlotDistributions(mydata)

Mathelab/IntLIM documentation built on July 9, 2022, 5:10 p.m.