OutputData: Output data into individual CSV files. All data will be...
In Mathelab/IntLIM: Integration of Omics Data Using Linear Modeling

OutputData

R Documentation

Output data into individual CSV files. All data will be zipped into one file with all data.

Description

Output data into individual CSV files. All data will be zipped into one file with all data.

Usage

OutputData(inputData = NULL, filename = "~/output.zip")

Arguments

`inputData`	data output from ReadData() or FilterData() function
`filename`	name of file to be output (default: '~/output.zip')

Value

the filename of the CSV file with results named with cohort

Examples

dir <- system.file("extdata", package="IntLIM", mustWork=TRUE)
csvfile <- file.path(dir, "NCItestinput.csv")
inputData <- ReadData(csvfile,metabid='id',geneid='id')
inputDatafilt <- FilterData(inputData,geneperc=0.5)
OutputData(inputData=inputDatafilt,filename="~/FilteredData.zip")

Mathelab/IntLIM documentation built on July 9, 2022, 5:10 p.m.