HistogramGMPairs: histogram of gene-metabolite pairs depending upon metabolite...

In Mathelab/IntLIM: Integration of Omics Data Using Linear Modeling

histogram of gene-metabolite pairs depending upon metabolite or gene

Description

histogram of gene-metabolite pairs depending upon metabolite or gene

Usage

HistogramGMPairs(inputResults, type = "metabolite", breaks = 50)

Arguments

inputResults	IntLimResults object with model results (output of RunIntLim() and ProcessResults())
type	'metabolite' or 'gene'. 'metabolite' set as default
breaks	Number of breaks selected for histogram

Examples

## Not run: 
dir <- system.file("extdata", package="IntLIM", mustWork=TRUE)
csvfile <- file.path(dir, "NCItestinput.csv")
mydata <- ReadData(csvfile,metabid='id',geneid='id')
myres <- RunIntLim(mydata,stype="PBO_vs_Leukemia")
myres <- ProcessResults(inputResults=myres,inputData=mydata)
HistogramGMPairs(inputResults=myres)

## End(Not run)

Mathelab/IntLIM documentation built on July 9, 2022, 5:10 p.m.