RunDoubletfinder: Function to run doublet finder

In Morriseylab/scExtras: Single cell data analysis helper functions

Function to run doublet finder

Description

Function to run doublet finder

Usage

RunDoubletfinder(
  object,
  dims,
  group = "var_cluster",
  doublet.formrate = 0.075,
  sct = T
)

Arguments

object	Seurat object
dims	Number of dimensions to use
group	variable to group the cells by
doublet.formrate	Doublet formation rate (Refer to Cellranger documentation. Depends on number of cells fed in)
sct	logical (T/F)

Morriseylab/scExtras documentation built on July 10, 2024, 6:41 a.m.