plotLineangeGene: Plot heatmap of the pseudotime data

In Morriseylab/scExtras: Single cell data analysis helper functions

Plot heatmap of the pseudotime data

Description

Plot heatmap of the pseudotime data

Usage

plotLineangeGene(
  object,
  features,
  lineage = "lineage1",
  col,
  lo.col = "red",
  hi.col = "green",
  group.by = NULL
)

Arguments

object	Seurat object
features	Vector of genes to be plotted
lineage	THe linage to be plotted such as lineage1
lo.col	Low value color
hi.col	high value color
group.by	Cluster variable used in slingshot

Morriseylab/scExtras documentation built on July 10, 2024, 6:41 a.m.