API for PapenfussLab/StructuralVariantAnnotation
VariantionAnnoration for Structural Variants

Global functions
\%na\% Man page
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aggregateFunctionsFor Man page Source code
as.matrix.list Source code
bedpe2breakpointgr Man page Source code
breakendRanges Man page Source code
breakpointRanges Man page Source code
calculateBlastHomology Man page Source code
calculateReferenceHomology Man page Source code
constrict Source code
countBreakpointOverlaps Man page Source code
dispatchPerAllele_CollapsedVCF Source code
dispatchPerAllele_ExpandedVCF Source code
distance Source code
drop Source code
elementExtract Man page
elementExtract.ANY Source code
elementExtract.List Source code
elementExtract.XStringSet Source code
emptyFill Source code
expectMetadataInfo Source code
extractBreakpointSequence Man page Source code
extractReferenceSequence Man page Source code
findBreakpointOverlaps Man page Source code
first Source code
hasMetadataInfo Source code
hasSingleAllelePerRecord Source code
isStructural Man page
isSymbolic Man page
pairs2breakpointgr Man page Source code
pairwiseLCPrefix Man page Source code
partner Man page Source code
sStructural Source code
sSymbolic Source code
svLen Source code
testfile Source code
testrecord Source code
transformFunctionsFor Man page Source code
unpack Man page
unpack.DataFrame Source code
zeroFill Source code
PapenfussLab/StructuralVariantAnnotation documentation built on May 24, 2018, 3:43 a.m.