breakpointGRangesToVCF: Converts the given breakpoint GRanges object to VCF format in...

Description Usage Arguments Value

View source: R/BreakpointGRanges.R

Description

Converts the given breakpoint GRanges object to VCF format in breakend notation.

Usage

1

Arguments

gr

breakpoint GRanges object. Can contain both breakpoint and single breakend SV records.

...

For cbind and rbind a list of VCF objects. For all other methods ... are additional arguments passed to methods. See VCF class in VariantAnnotation for more details.

Value

A VCF object.


PapenfussLab/StructuralVariantAnnotation documentation built on Dec. 25, 2021, 1:20 a.m.