RTN.analysis: RTN Reconstruction of Transcriptional regulatory Networks...
In ProfessionalFarmer/loonR: Common function in bioinformatics analysis
RTN.analysis R Documentation
RTN Reconstruction of Transcriptional regulatory Networks analysis
Description
RTN Reconstruction of Transcriptional regulatory Networks analysis
Usage
RTN.analysis(
TFs = NULL,
expData = NULL,
group = NULL,
cores = 1,
nPermutations = 1000,
phenotype = NULL,
hits = NULL
)
Arguments
TFs
transcription factors. vector
expData
row is gene, include TFs and genes
cores
Default 1
nPermutations
Default 1000
phenotype
A named vector, logFC, include TFs and genes
hits
ProfessionalFarmer/loonR documentation built on Oct. 9, 2024, 9:56 p.m.
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| RTN.analysis | R Documentation |
RTN Reconstruction of Transcriptional regulatory Networks analysis
Description
RTN Reconstruction of Transcriptional regulatory Networks analysis
Usage
RTN.analysis(
TFs = NULL,
expData = NULL,
group = NULL,
cores = 1,
nPermutations = 1000,
phenotype = NULL,
hits = NULL
)
Arguments
TFs |
transcription factors. vector |
expData |
row is gene, include TFs and genes |
cores |
Default 1 |
nPermutations |
Default 1000 |
phenotype |
A named vector, logFC, include TFs and genes |
hits |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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