draw.mutation.type: Count each event type and draw pie chart

In ProfessionalFarmer/loonR: Common function in bioinformatics analysis

Count each event type and draw pie chart

Description

This function is evry similar to SuppaEventPie. Here the pie is draw based on ggplot2.

Usage

draw.mutation.type(
  data,
  color = "jco",
  colid = 2,
  alpha = 0.8,
  title = "",
  border = "white"
)

Arguments

data	A data.frame or list object.
color	ggsci color palette
colid	If provide data.frame, column id need to be set
alpha	Alpha value in plot
title	Pie title
border	Border color

Value

ggplot2 object

Examples

draw.mutation.type(res$Func.refGene, title = "# of mutation")
or draw.mutation.type(res, col = 6, title = "# of mutation")

ProfessionalFarmer/loonR documentation built on Oct. 9, 2024, 9:56 p.m.