gapStat: Gap statistics
In ProfessionalFarmer/loonR: Common function in bioinformatics analysis
gapStat R Documentation
Gap statistics
Description
Gap statistics
Usage
gapStat(df, dist = "spearman", method = "average")
Arguments
df
Row is sample, column is variable
dist
a character string indicating which correlation coefficient (or covariance) is to be computed. One of "pearson" (default), "kendall", or "spearman"
method
Default "Average". The agglomeration method to be used. This should be (an unambiguous abbreviation of) one of "ward.D", "ward.D2", "single", "complete", "average" (= UPGMA), "mcquitty" (= WPGMA), "median" (= WPGMC) or "centroid" (= UPGMC)
ProfessionalFarmer/loonR documentation built on Oct. 9, 2024, 9:56 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| gapStat | R Documentation |
Gap statistics
Description
Gap statistics
Usage
gapStat(df, dist = "spearman", method = "average")
Arguments
df |
Row is sample, column is variable |
dist |
a character string indicating which correlation coefficient (or covariance) is to be computed. One of "pearson" (default), "kendall", or "spearman" |
method |
Default "Average". The agglomeration method to be used. This should be (an unambiguous abbreviation of) one of "ward.D", "ward.D2", "single", "complete", "average" (= UPGMA), "mcquitty" (= WPGMA), "median" (= WPGMC) or "centroid" (= UPGMC) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.