heatmap.with.wordcloud: Plot heatmap while perform word cloud analysis
In ProfessionalFarmer/loonR: Common function in bioinformatics analysis

heatmap.with.wordcloud

R Documentation

Plot heatmap while perform word cloud analysis

Description

Plot heatmap while perform word cloud analysis

Usage

heatmap.with.wordcloud(df)

Arguments

`df`	row is sample, column is gene. Will perform gene correlation analysis instead of sample-wise

Examples

# https://jokergoo.github.io/simplifyEnrichment/articles/word_cloud_anno.html

df = data.frame(`a b c dd` = c(1,2,1,1,1), `a d c bb a c` =  c(3,2,3,1,1), `bb aa cc dd` = c(4,2,5,7,6))
M = cor(df)
# show correlation
corrplot(M, method = 'number', order = 'hclust')

ProfessionalFarmer/loonR documentation built on Oct. 9, 2024, 9:56 p.m.