plotVenn: Plot venn diagram by ggvenn

In ProfessionalFarmer/loonR: Common function in bioinformatics analysis

Plot venn diagram by ggvenn

Description

Plot venn diagram by ggvenn

Usage

plotVenn(
  l.list,
  alpha = 0.5,
  palette = "aaas",
  show_elements = FALSE,
  show_percentage = TRUE,
  text_size = 4,
  set_name_size = 6,
  title = NULL
)

Arguments

l.list	a list as input data
alpha	Default 0.5
palette	Default aaas
show_elements	Show set elements instead of count/percentage.
show_percentage	Show percentage for each set.
text_size	Default 4, Text size for intersect contents.
set_name_size	Default 6, Text color for set names.
title

Value

The ggplot object to print or save to file.

Examples

plotVenn(l.list)
l.list = list(`Up in early HCC` = early.up.genes,
`Down in early HCC` = early.down.genes,
`Up in advanced HCC` = advanced.up.genes,
`Down in advanced HCC` = advanced.down.genes)
plotVenn(l.list)

ProfessionalFarmer/loonR documentation built on Oct. 9, 2024, 9:56 p.m.