roc_with_ci: plot ROC with CI. Stratified bootstrap 2000 times

In ProfessionalFarmer/loonR: Common function in bioinformatics analysis

plot ROC with CI. Stratified bootstrap 2000 times

Description

plot ROC with CI. Stratified bootstrap 2000 times

Usage

roc_with_ci(
  label,
  rs,
  font = "Arial",
  palette = "jama",
  legend.pos = c(0.4, 0.2),
  title = NULL,
  fontsize = 16,
  panel = NULL,
  SE.SP = FALSE,
  ci = TRUE
)

Arguments

label	True label
rs	Predicted score
font	Font
panel	panel的第一列为factor，event，class等
SE.SP	Whether to show SE and SP instead of CI of AUC
ci	Default draw CI interval

Value

ggplot object

Examples

data("LIRI")
loonR::roc_with_ci(LIRI$status, LIRI$ANLN,
   panel = data.frame(Evebt=LIRI$status, LIRI[,c(3,4)])  )


roc_with_ci(labels, rs,
            font = "Arial",
            palette = "jama_classic",
            title = "HGD vs Healthy",
            panel = data.frame(Evebt=labels, data)
)

ProfessionalFarmer/loonR documentation built on Oct. 9, 2024, 9:56 p.m.