run_spotlight: run spotlight
In ProfessionalFarmer/loonR: Common function in bioinformatics analysis
run_spotlight R Documentation
run spotlight
Description
run spotlight
Usage
run_spotlight(
scRNA = NULL,
spatial = NULL,
downsample = 100,
feature.auc = 0.75,
top_n_feature = 50
)
Arguments
scRNA
Seurat object
spatial
Seurat object
downsample
Default 100
feature.auc
Default 0.75 when selecting cluster marker
top_n_feature
Default 50
ProfessionalFarmer/loonR documentation built on June 10, 2025, 10:44 a.m.
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| run_spotlight | R Documentation |
run spotlight
Description
run spotlight
Usage
run_spotlight(
scRNA = NULL,
spatial = NULL,
downsample = 100,
feature.auc = 0.75,
top_n_feature = 50
)
Arguments
scRNA |
Seurat object |
spatial |
Seurat object |
downsample |
Default 100 |
feature.auc |
Default 0.75 when selecting cluster marker |
top_n_feature |
Default 50 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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