simplifyEnrichment: GO annotation with word cloud
In ProfessionalFarmer/loonR: Common function in bioinformatics analysis
simplifyEnrichment R Documentation
GO annotation with word cloud
Description
GO annotation with word cloud
Usage
simplifyEnrichment(go_ids, measure = "Rel", cluster_method = "binary_cut")
Arguments
go_ids
A vector of GO IDs
measure
Semantic measure for the GO similarity, see https://rdrr.io/pkg/GOSemSim/man/termSim.html
cluster_method
https://jokergoo.github.io/simplifyEnrichment/reference/cluster_terms.html
ProfessionalFarmer/loonR documentation built on Oct. 9, 2024, 9:56 p.m.
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| simplifyEnrichment | R Documentation |
GO annotation with word cloud
Description
GO annotation with word cloud
Usage
simplifyEnrichment(go_ids, measure = "Rel", cluster_method = "binary_cut")
Arguments
go_ids |
A vector of GO IDs |
measure |
Semantic measure for the GO similarity, see https://rdrr.io/pkg/GOSemSim/man/termSim.html |
cluster_method |
https://jokergoo.github.io/simplifyEnrichment/reference/cluster_terms.html |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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