tcgabiolinks.get.RNA.expression.log2tpm: Download RAN expression by TCGAbiolinks
In ProfessionalFarmer/loonR: Common function in bioinformatics analysis
tcgabiolinks.get.RNA.expression.log2tpm R Documentation
Download RAN expression by TCGAbiolinks
Description
Download RAN expression by TCGAbiolinks
Usage
tcgabiolinks.get.RNA.expression.log2tpm(
project,
remove.Raw = FALSE,
dir = "~/rspace/GDCdata"
)
Arguments
project
E.g. TCGA-LIHC
remove.Raw
If to remove raw data
dir
Raw data directory
Value
list(clinical = clinical, expression = expression.df, group = group)
Expression was log2 transformed.
Group is a data.frame including label, short name and sample barcode
Clinical is a list
ProfessionalFarmer/loonR documentation built on Oct. 9, 2024, 9:56 p.m.
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| tcgabiolinks.get.RNA.expression.log2tpm | R Documentation |
Download RAN expression by TCGAbiolinks
Description
Download RAN expression by TCGAbiolinks
Usage
tcgabiolinks.get.RNA.expression.log2tpm(
project,
remove.Raw = FALSE,
dir = "~/rspace/GDCdata"
)
Arguments
project |
E.g. TCGA-LIHC |
remove.Raw |
If to remove raw data |
dir |
Raw data directory |
Value
list(clinical = clinical, expression = expression.df, group = group) Expression was log2 transformed. Group is a data.frame including label, short name and sample barcode Clinical is a list
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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