naFreq-snpMatrix-method: NA frequency
In QTCAT/qtcat: Quantitative Trait Cluster Association Test
Description
Usage
Arguments
Examples
Description
NA frequency in an object of class snpMatrix.
Usage
1
2
Arguments
x
an object of class snpMatrix.
dim
a integer for dimension. 1 (default) is for rows (individuals), 2 is for
columns (SNPs).
Examples
1
2
3
4
5
# file containing example data for SNP data
gfile <- system.file("extdata/snpdata.csv", package = "qtcat")
snp <- read.snpData(gfile, sep = ",")
na1 <- naFreq(snp, 1)
na2 <- naFreq(snp, 2)
QTCAT/qtcat documentation built on April 20, 2021, 11:20 p.m.
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Description Usage Arguments Examples
Description
NA frequency in an object of class snpMatrix.
Usage
1 2 |
Arguments
x |
an object of class snpMatrix. |
dim |
a integer for dimension. 1 (default) is for rows (individuals), 2 is for columns (SNPs). |
Examples
1 2 3 4 5 | # file containing example data for SNP data
gfile <- system.file("extdata/snpdata.csv", package = "qtcat")
snp <- read.snpData(gfile, sep = ",")
na1 <- naFreq(snp, 1)
na2 <- naFreq(snp, 2)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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