Files in RGLab/cytoqc
Quality control and standardization of cytometry data
.Rbuildignore
.github/workflows/build.yml
DESCRIPTION
LICENSE
NAMESPACE
R/cqc_check.R
R/cqc_cluster.R
R/cqc_fix.R
R/cqc_io.R
R/cqc_match.R
R/cqc_plot.R
R/cqc_recommend.R
R/cytoqc-package.R
R/print.R
inst/extdata/GvHD_QC/s10a01.fcs
inst/extdata/GvHD_QC/s10a02.fcs
inst/extdata/GvHD_QC/s10a03.fcs
inst/extdata/GvHD_QC/s10a04.fcs
inst/extdata/GvHD_QC/s10a05.fcs
inst/extdata/GvHD_QC/s10a06.fcs
inst/extdata/GvHD_QC/s10a07.fcs
inst/extdata/GvHD_QC/s5a01.fcs
inst/extdata/GvHD_QC/s5a02.fcs
inst/extdata/GvHD_QC/s5a03.fcs
inst/extdata/GvHD_QC/s5a04.fcs
inst/extdata/GvHD_QC/s5a05.fcs
inst/extdata/GvHD_QC/s5a06.fcs
inst/extdata/GvHD_QC/s5a07.fcs
inst/extdata/GvHD_QC/s6a01.fcs
inst/extdata/GvHD_QC/s6a02.fcs
inst/extdata/GvHD_QC/s6a03.fcs
inst/extdata/GvHD_QC/s6a04.fcs
inst/extdata/GvHD_QC/s6a05.fcs
inst/extdata/GvHD_QC/s6a06.fcs
inst/extdata/GvHD_QC/s6a07.fcs
inst/extdata/GvHD_QC/s7a01.fcs
inst/extdata/GvHD_QC/s7a02.fcs
inst/extdata/GvHD_QC/s7a03.fcs
inst/extdata/GvHD_QC/s7a04.fcs
inst/extdata/GvHD_QC/s7a05.fcs
inst/extdata/GvHD_QC/s7a06.fcs
inst/extdata/GvHD_QC/s7a07.fcs
inst/extdata/GvHD_QC/s9a01.fcs
inst/extdata/GvHD_QC/s9a02.fcs
inst/extdata/GvHD_QC/s9a03.fcs
inst/extdata/GvHD_QC/s9a04.fcs
inst/extdata/GvHD_QC/s9a05.fcs
inst/extdata/GvHD_QC/s9a06.fcs
inst/extdata/GvHD_QC/s9a07.fcs
inst/extdata/gslist_manual_QC/gs1/1.fcs.h5
inst/extdata/gslist_manual_QC/gs1/1.fcs.pb
inst/extdata/gslist_manual_QC/gs1/ac1a3db5-bff3-46be-b8f8-783c4e94b554.gs
inst/extdata/gslist_manual_QC/gs2/2.fcs.h5
inst/extdata/gslist_manual_QC/gs2/2.fcs.pb
inst/extdata/gslist_manual_QC/gs2/8588cf73-c8e3-4779-ae85-e678ba9a3d70.gs
inst/extdata/gslist_manual_QC/gs3/3.fcs.h5
inst/extdata/gslist_manual_QC/gs3/3.fcs.pb
inst/extdata/gslist_manual_QC/gs3/4aa7b94a-cf82-45c0-9cde-a14a834c6e1e.gs
inst/extdata/gslist_manual_QC/gs4/38a97f93-c6d8-4820-9953-56217c14fcd9.gs
inst/extdata/gslist_manual_QC/gs4/4.fcs.h5
inst/extdata/gslist_manual_QC/gs4/4.fcs.pb
inst/extdata/gslist_manual_QC/gs5/4d44e419-1391-4df2-ad15-d44951d43b36.gs
inst/extdata/gslist_manual_QC/gs5/5.fcs.h5
inst/extdata/gslist_manual_QC/gs5/5.fcs.pb
lyoplate/DC.Rmd
lyoplate/bcell.Rmd
lyoplate/parsews.R
lyoplate/tcell.Rmd
lyoplate/tcell.md
lyoplate/tcell_files/figure-gfm/unnamed-chunk-5-1.png
lyoplate/tcell_files/figure-gfm/unnamed-chunk-5-2.png
man/cf_get_panel.Rd
man/cqc_cf_list.Rd
man/cqc_check.Rd
man/cqc_cluster.Rd
man/cqc_delete.Rd
man/cqc_drop_groups.Rd
man/cqc_fix.Rd
man/cqc_fix_panel.Rd
man/cqc_get_data.Rd
man/cqc_gs.Rd
man/cqc_gs_list.Rd
man/cqc_insert.Rd
man/cqc_load_fcs.Rd
man/cqc_match.Rd
man/cqc_match_update.Rd
man/cqc_plot.Rd
man/cqc_recommend.Rd
man/cqc_set_panel.Rd
man/cqc_update.Rd
man/cqc_write_fcs.Rd
man/cytoqc-package.Rd
man/diff.cqc_check.Rd
man/knit_print.cqc_check_summary.Rd
man/plot_diff.Rd
man/split.cqc_check.Rd
man/split.cqc_cluster.Rd
man/summary.cqc_check.Rd
readme.Rmd
readme.md
tests/testthat.R
tests/testthat/helper.R
tests/testthat/test-channel_rotate.R
tests/testthat/test-check.R
tests/testthat/test_results.rds
vignettes/.gitignore
vignettes/gates.Rmd
vignettes/introduction.Rmd
vignettes/keywords.Rmd
vignettes/marker.Rmd
