plot_diff: visualize the tree structure difference among the GatingSets
In RGLab/cytoqc: Quality control and standardization of cytometry data

plot_diff

R Documentation

visualize the tree structure difference among the GatingSets

Description

visualize the tree structure difference among the GatingSets

Usage

plot_diff(groups)

Arguments

groups

cqc_check_gate grouping resulte from cqc_check.

Examples

library(flowWorkspace)
gs_paths <- list.files(system.file("extdata", "gslist_manual_QC", package = "cytoqc"), full.names = TRUE)
gs1 <- load_gs(gs_paths[[1]])
gs2 <- load_gs(gs_paths[[2]])
qc_gslist <- cqc_gs_list(list(gs1, gs2))
groups <- cqc_check(qc_gslist, type="gate")
plot_diff(groups)

RGLab/cytoqc documentation built on Jan. 25, 2023, 11:05 p.m.