plot_diff: visualize the tree structure difference among the GatingSets
In RGLab/cytoqc: Quality control and standardization of cytometry data
Description
Usage
Arguments
Examples
Description
visualize the tree structure difference among the GatingSets
Usage
1
plot_diff(groups)
Arguments
groups
cqc_check_gate grouping resulte from cqc_check.
Examples
1
2
3
4
5
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7
library(flowWorkspace)
gs_paths <- list.files(system.file("extdata", "gslist_manual_QC", package = "cytoqc"), full.names = TRUE)
gs1 <- load_gs(gs_paths[[1]])
gs2 <- load_gs(gs_paths[[2]])
qc_gslist <- cqc_gs_list(list(gs1, gs2))
groups <- cqc_check(qc_gslist, type="gate")
plot_diff(groups)
RGLab/cytoqc documentation built on Nov. 25, 2020, 11:27 p.m.
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Description Usage Arguments Examples
Description
visualize the tree structure difference among the GatingSets
Usage
1 | plot_diff(groups)
|
Arguments
groups |
|
Examples
1 2 3 4 5 6 7 | library(flowWorkspace)
gs_paths <- list.files(system.file("extdata", "gslist_manual_QC", package = "cytoqc"), full.names = TRUE)
gs1 <- load_gs(gs_paths[[1]])
gs2 <- load_gs(gs_paths[[2]])
qc_gslist <- cqc_gs_list(list(gs1, gs2))
groups <- cqc_check(qc_gslist, type="gate")
plot_diff(groups)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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