plot_diff: visualize the tree structure difference among the GatingSets

Description Usage Arguments Examples

View source: R/cqc_check.R

Description

visualize the tree structure difference among the GatingSets

Usage

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plot_diff(groups)

Arguments

groups

cqc_check_gate grouping resulte from cqc_check.

Examples

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library(flowWorkspace)
gs_paths <- list.files(system.file("extdata", "gslist_manual_QC", package = "cytoqc"), full.names = TRUE)
gs1 <- load_gs(gs_paths[[1]])
gs2 <- load_gs(gs_paths[[2]])
qc_gslist <- cqc_gs_list(list(gs1, gs2))
groups <- cqc_check(qc_gslist, type="gate")
plot_diff(groups)

RGLab/cytoqc documentation built on Nov. 25, 2020, 11:27 p.m.